{"id":916,"date":"2021-03-02T08:03:32","date_gmt":"2021-03-02T06:03:32","guid":{"rendered":"https:\/\/wits-vida.org\/wordpress21\/?post_type=avada_faq&p=916"},"modified":"2023-10-10T16:13:53","modified_gmt":"2023-10-10T14:13:53","slug":"dr-vicky-lynne-baillie","status":"publish","type":"avada_faq","link":"https:\/\/wits-vida.org\/team-member\/dr-vicky-lynne-baillie\/","title":{"rendered":"Dr Vicky Lynne Baillie"},"content":{"rendered":"

<\/span><\/div>

Dr Vicky Lynne Baillie<\/h2><\/div>

Senior Scientist<\/h4><\/div><\/div><\/div>

About<\/h4><\/div>

Dr Vicky Lynne Baillie (PhD in Clinical Virology) is a scientist at the Vaccines and Infectious Diseases Analytics (VIDA) Research Unit of the University of the Witwatersrand where she leads the laboratory aspects of the Child Health and Mortality Prevention study as well as two other mortality aetiology studies. She has been integrally involved in the ChAdOx1 nCoV-19 vaccine trial in South Africa as well as studies looking into the surveillance of COVID-19 in hospitalised patients and the health care workers that care for them. She is also co-PI on a grant funded study which has allowed Wits VIDA to expand into Next Generation Sequencing (NGS) and which has allowed her to secure additional funding for sequencing the SARS-CoV-2 genome across numerous studies.<\/p>\n

Vicky\u2019s research portfolio focuses on the molecular detection of the aetiology of disease which includes the validation and optimisation of multiple assays including microfluidic applications and hopes to expand Wits VIDA\u2019s NGS and bioinformatic capabilities even further in the near future. During her 10 years at Wits VIDA, Vicky has authored and co-authored over 30 peer reviewed journal articles and is currently supervising five post graduate students.<\/p>\n<\/div>

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ORCiD<\/span><\/a><\/div>
LinkedIn<\/span><\/a><\/div><\/div><\/div><\/div><\/div>

Publications<\/h4><\/div>
\n\t\t\t\t\n\t\t\t\t2023<\/a><\/label>\n\n\t\t\t\n\t\t\t\t\n\t\t\t\t2022<\/a><\/label>\n\n\t\t\t\n\t\t\t\t\n\t\t\t\t2021<\/a><\/label>\n\n\t\t\t\n\t\t\t\t\n\t\t\t\t2020<\/a><\/label>\n\n\t\t\t\n\t\t\t\t\n\t\t\t\t2019<\/a><\/label>\n\n\t\t\t\n\t\t\t\t\n\t\t\t\t2018<\/a><\/label>\n\n\t\t\t\n\t\t\t\t\n\t\t\t\t2017<\/a><\/label>\n\n\t\t\t\n\t\t\t\t\n\t\t\t\t2016<\/a><\/label>\n\n\t\t\t\n\t\t\t\t\n\t\t\t\t2013<\/a><\/label>\n\n\t\t\t\n\t\t\t\t\n\t\t\t\t2012<\/a><\/label>\n\n\t\t\t\n\t\t\t\t\n\t\t\t\t2011<\/a><\/label>\n\n\t\t\t<\/form>

Baillie VL; Madhi SA; Ahyong V; Olwagen CP<\/span>, 2023<\/span>. Metagenomic sequencing of post-mortem tissue samples for the identification of pathogens associated with neonatal deaths.<\/a><\/span>  Nat Commun<\/span> 14(1):5373<\/span><\/p>

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Mahtab S; Madhi SA; Baillie VL; Els T; Thwala BN; Onyango D; Tippet-Barr BA; Akelo V; Igunza KA; Omore R; Arifeen SE; Gurley ES; Alam M; Chowdhury AI; Rahman A; Bassat Q; Mandomando I; Ajanovic S; Sitoe A; Varo R; Sow SO; Kotloff KL; Badji H; Tapia MD; Traore CB; Ogbuanu IU; Bunn J; Luke R; Sannoh S; Swarray-Deen A; Assefa N; Scott JAG; Madrid L; Marami D; Fentaw S; Diaz MH; Martines RB; Breiman RF; Madewell ZJ; Blau DM; Whitney CG<\/span>, 2023<\/span>. Causes of death identified in neonates enrolled through Child Health and Mortality Prevention Surveillance (CHAMPS), December 2016 -December 2021.<\/a><\/span>  PLOS Glob Public Health<\/span> 3(3):e0001612<\/span><\/p>

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Nunes MC; Jones S; Strehlau R; Baba V; Ditse Z; da Silva K; Bothma L; Serafin N; Baillie VL; Kwatra G; Burke M; Wise A; Adam M; Mlandu P; Melamu M; Phelp J; Fraser W; Wright C; Zell E; Adam Y; Madhi SA<\/span>, 2022<\/span>. Antepartum SARS-CoV-2 infection and adverse birth outcomes in South African women.<\/a><\/span>  J Glob Health<\/span> 12:05050<\/span><\/p>

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Nunes MC; Jones S; Strehlau R; Baba V; Ditse Z; da Silva K; Bothma L; Serafin N; Baillie VL; Kwatra G; Burke M; Wise A; Adam M; Mlandu P; Melamu M; Phelp J; Fraser W; Wright C; Zell E; Adam Y; Madhi SA<\/span>, 2022<\/span>. Active Intrapartum SARS-CoV-2 Infection and Pregnancy Outcomes.<\/a><\/span>  Am J Perinatol<\/span> 39(S 01):S42-S48<\/span><\/p>

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Nakwa FL; Thomas R; van Kwawegen A; Ntuli N; Seake K; Kesting SJ; Kamanga NHB; Kgwadi DM; Chami N; Mogajane T; Ondongo-Ezhet C; Maphosa TN; Jones S; Baillie VL; Madhi SA; Velaphi S<\/span>, 2022<\/span>. An outbreak of infection due to severe acute respiratory corona virus-2 in a neonatal unit from a low and middle income setting.<\/a><\/span>  Front Pediatr<\/span> 10:933982<\/span><\/p>

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Nunes MC; Jones S; Ditse Z; da Silva K; Serafin N; Strehlau R; Wise A; Burke M; Baba V; Baillie VL; Nzimande A; Jafta N; Adam M; Mlandu P; Melamu M; Phelp J; Feldman C; Adam Y; Madhi SA; Kwatra G<\/span>, 2022<\/span>. Maternal-foetal transfer of severe acute respiratory syndrome coronavirus 2 antibodies among women with and those without HIV infection.<\/a><\/span>  AIDS<\/span> 36(13):1777-1782<\/span><\/p>

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Nunes MC; Mbotwe-Sibanda S; Baillie VL; Kwatra G; Aguas R; Madhi SA; On Behalf Of The Wits Vida Hcw Study Group<\/span>, 2022<\/span>. SARS-CoV-2 Omicron Symptomatic Infections in Previously Infected or Vaccinated South African Healthcare Workers.<\/a><\/span>  Vaccines (Basel)<\/span> 10<\/span>.<\/p>

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Nunes MC; Hale MJ; Mahtab S; Mabena FC; Dludlu N; Baillie VL; Thwala BN; Els T; du Plessis J; Laubscher M; Mckenzie S; Mtshali S; Menezes C; Serafin N; van Blydenstein S; Tsitsi M; Dulisse B; Madhi SA<\/span>, 2022<\/span>. Clinical characteristics and histopathology of COVID-19 related deaths in South African adults.<\/a><\/span>  PLoS One<\/span> 17(1):e0262179<\/span><\/p>

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Breiman RF; Blau DM; Mutevedzi P; Akelo V; Mandomando I; Ogbuanu IU; Sow SO; Madrid L; El Arifeen S; Garel M; Thwala NB; Onyango D; Sitoe A; Bassey IA; Keita AM; Alemu A; Alam M; Mahtab S; Gethi D; Varo R; Ojulong J; Samura S; Mehta A; Ibrahim AM; Rahman A; Vitorino P; Baillie VL; Agaya J; Tapia MD; Assefa N; Chowdhury AI; Scott JAG; Gurley ES; Kotloff KL; Jambai A; Bassat Q; Tippett-Barr BA; Madhi SA; Whitney CG<\/span>, 2021<\/span>. Postmortem investigations and identification of multiple causes of child deaths: An analysis of findings from the Child Health and Mortality Prevention Surveillance (CHAMPS) network.<\/a><\/span>  PLoS Med<\/span> 18(9):e1003814<\/span><\/p>

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Blau DM; Baillie VL; Els T; Mahtab S; Mutevedzi P; Keita AM; Kotloff KL; Mehta A; Sow SO; Tapia MD; Tippett Barr BA; Oluoch BO; Onyango C; Revathi G; Verani JR; Abayneh M; Assefa N; Madrid L; Oundo JO; Scott JAG; Bassat Q; Mandomando I; Sitoe A; Valente M; Varo R; Bassey IA; Cain CJ; Jambai A; Ogbuanu I; Ojulong J; Alam M; El Arifeen S; Gurley ES; Rahman A; Rahman M; Waller JL; Dewey B; Breiman RF; Whitney CG; Madhi SA<\/span>, 2021<\/span>. Deaths Attributed to Respiratory Syncytial Virus in Young Children in High-Mortality Rate Settings: Report from Child Health and Mortality Prevention Surveillance (CHAMPS).<\/a><\/span>  Clin Infect Dis<\/span> 73(Suppl_3):S218-S228<\/span><\/p>

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Baillie VL; Moore DP; Mathunjwa A; Park DE; Thea DM; Kwenda G; Mwananyanda L; Madhi SA<\/span>, 2021<\/span>. Epidemiology and Seasonality of Endemic Human Coronaviruses in South African and Zambian Children: A Case-Control Pneumonia Study.<\/a><\/span>  Viruses<\/span> 13<\/span>.<\/p>

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Moore DP; Baillie VL; Mudau A; Wadula J; Adams T; Mangera S; Verwey C; Sipambo N; Liberty A; Prosperi C; Higdon MM; Haddix M; Hammitt LL; Feikin DR; O'Brien KL; Deloria Knoll M; Murdoch DR; Sim\u00f5es EAF; Madhi SA<\/span>, 2021<\/span>. The Etiology of Pneumonia in HIV-1-infected South African Children in the Era of Antiretroviral Treatment: Findings From the Pneumonia Etiology Research for Child Health (PERCH) Study.<\/a><\/span>  Pediatr Infect Dis J<\/span> 40(9S):S69-S78<\/span><\/p>

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Moore DP; Baillie VL; Mudau A; Wadula J; Adams T; Mangera S; Verwey C; Prosperi C; Higdon MM; Haddix M; Hammitt LL; Feikin DR; O'Brien KL; Deloria Knoll M; Murdoch DR; Sim\u00f5es EAF; Madhi SA<\/span>, 2021<\/span>. The Etiology of Pneumonia in HIV-uninfected South African Children: Findings From the Pneumonia Etiology Research for Child Health (PERCH) Study.<\/a><\/span>  Pediatr Infect Dis J<\/span> 40(9S):S59-S68<\/span><\/p>

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Mabena FC; Baillie VL; Hale MJ; Thwala BN; Mthembu N; Els T; Serafin N; du Plessis J; Swart P; Velaphi SC; Petersen KL; Wadula J; Govender NP; Verwey C; Moore DP; Moosa FY; Nakwa FL; Maroane BV; Okudo G; Mabaso TM; Dangor Z; Nunes MC; Madhi SA<\/span>, 2021<\/span>. Clinical Characteristics and Histopathology of Coronavirus Disease 2019-Related Deaths in African Children.<\/a><\/span>  Pediatr Infect Dis J<\/span> 40(9):e323-e332<\/span><\/p>

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Baillie VL; Moore DP; Mathunjwa A; Baggett HC; Brooks A; Feikin DR; Hammitt LL; Howie SRC; Knoll MD; Kotloff KL; Levine OS; O'Brien KL; Scott AG; Thea DM; Antonio M; Awori JO; Driscoll AJ; Fancourt NSS; Higdon MM; Karron RA; Morpeth SC; Mulindwa JM; Murdoch DR; Park DE; Prosperi C; Rahman MZ; Rahman M; Salaudeen RA; Sawatwong P; Somwe SW; Sow SO; Tapia MD; Sim\u00f5es EAF; Madhi SA<\/span>, 2021<\/span>. Epidemiology of the Rhinovirus (RV) in African and Southeast Asian Children: A Case-Control Pneumonia Etiology Study.<\/a><\/span>  Viruses<\/span> 13<\/span>.<\/p>

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Nunes MC; Baillie VL; Kwatra G; Bhikha S; Verwey C; Menezes C; Cutland CL; Moore DP; Dangor Z; Adam Y; Mathivha R; Velaphi SC; Tsitsi M; Aguas R; Madhi SA<\/span>, 2021<\/span>. Severe Acute Respiratory Syndrome Coronavirus 2 Infection Among Healthcare Workers in South Africa: A Longitudinal Cohort Study.<\/a><\/span>  Clin Infect Dis<\/span> 73(10):1896-1900<\/span><\/p>

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Park DE; Higdon MM; Prosperi C; Baggett HC; Brooks WA; Feikin DR; Hammitt LL; Howie SRC; Kotloff KL; Levine OS; Madhi SA; Murdoch DR; O'Brien KL; Scott JAG; Thea DM; Antonio M; Awori JO; Baillie VL; Bunthi C; Kwenda G; Mackenzie GA; Moore DP; Morpeth SC; Mwananyanda L; Paveenkittiporn W; Ziaur Rahman M; Rahman M; Rhodes J; Sow SO; Tapia MD; Deloria Knoll M<\/span>, 2021<\/span>. Upper Respiratory Tract Co-detection of Human Endemic Coronaviruses and High-density Pneumococcus Associated With Increased Severity Among HIV-Uninfected Children Under 5 Years Old in the PERCH Study.<\/a><\/span>  Pediatr Infect Dis J<\/span> 40(6):503-512<\/span><\/p>

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Voysey M; Costa Clemens SA; Madhi SA; Weckx LY; Folegatti PM; Aley PK; Angus B; Baillie VL; Barnabas SL; Bhorat QE; Bibi S; Briner C; Cicconi P; Clutterbuck EA; Collins AM; Cutland CL; Darton TC; Dheda K; Dold C; Duncan CJA; Emary KRW; Ewer KJ; Flaxman A; Fairlie L; Faust SN; Feng S; Ferreira DM; Finn A; Galiza E; Goodman AL; Green CM; Green CA; Greenland M; Hill C; Hill HC; Hirsch I; Izu A; Jenkin D; Joe CCD; Kerridge S; Koen A; Kwatra G; Lazarus R; Libri V; Lillie PJ; Marchevsky NG; Marshall RP; Mendes AVA; Milan EP; Minassian AM; McGregor A; Mujadidi YF; Nana A; Padayachee SD; Phillips DJ; Pittella A; Plested E; Pollock KM; Ramasamy MN; Ritchie AJ; Robinson H; Schwarzbold AV; Smith A; Song R; Snape MD; Sprinz E; Sutherland RK; Thomson EC; T\u00f6r\u00f6k ME; Toshner M; Turner DPJ; Vekemans J; Villafana TL; White T; Williams CJ; Douglas AD; Hill AVS; Lambe T; Gilbert SC; Pollard AJ<\/span>, 2021<\/span>. Single-dose administration and the influence of the timing of the booster dose on immunogenicity and efficacy of ChAdOx1 nCoV-19 (AZD1222) vaccine: a pooled analysis of four randomised trials.<\/a><\/span>  Lancet<\/span> 397(10277):881-891<\/span><\/p>

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Voysey M; Clemens SAC; Madhi SA; Weckx LY; Folegatti PM; Aley PK; Angus B; Baillie VL; Barnabas SL; Bhorat QE; Bibi S; Briner C; Cicconi P; Collins AM; Colin-Jones R; Cutland CL; Darton TC; Dheda K; Duncan CJA; Emary KRW; Ewer KJ; Fairlie L; Faust SN; Feng S; Ferreira DM; Finn A; Goodman AL; Green CM; Green CA; Heath PT; Hill C; Hill H; Hirsch I; Hodgson SHC; Izu A; Jackson S; Jenkin D; Joe CCD; Kerridge S; Koen A; Kwatra G; Lazarus R; Lawrie AM; Lelliott A; Libri V; Lillie PJ; Mallory R; Mendes AVA; Milan EP; Minassian AM; McGregor A; Morrison H; Mujadidi YF; Nana A; O'Reilly PJ; Padayachee SD; Pittella A; Plested E; Pollock KM; Ramasamy MN; Rhead S; Schwarzbold AV; Singh N; Smith A; Song R; Snape MD; Sprinz E; Sutherland RK; Tarrant R; Thomson EC; T\u00f6r\u00f6k ME; Toshner M; Turner DPJ; Vekemans J; Villafana TL; Watson MEE; Williams CJ; Douglas AD; Hill AVS; Lambe T; Gilbert SC; Pollard AJ<\/span>, 2021<\/span>. Safety and efficacy of the ChAdOx1 nCoV-19 vaccine (AZD1222) against SARS-CoV-2: an interim analysis of four randomised controlled trials in Brazil, South Africa, and the UK.<\/a><\/span>  Lancet<\/span> 397(10269):99-111<\/span><\/p>

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Wang X; Li Y; Deloria-Knoll M; Madhi SA; Cohen C; Ali A; Basnet S; Bassat Q; Brooks WA; Chittaganpitch M; Echavarria M; Fasce RA; Goswami D; Hirve S; Homaira N; Howie SRC; Kotloff KL; Khuri-Bulos N; Krishnan A; Lucero MG; Lupisan S; Mira-Iglesias A; Moore DP; Moraleda C; Nunes M; Oshitani H; Owor BE; Polack FP; O'Brien KL; Rasmussen ZA; Rath BA; Salimi V; Scott JAG; Sim\u00f5es EAF; Strand TA; Thea DM; Treurnicht FK; Vaccari LC; Yoshida LM; Zar HJ; Campbell H; Nair H<\/span>, 2021<\/span>. Global burden of acute lower respiratory infection associated with human metapneumovirus in children under 5 years in 2018: a systematic review and modelling study.<\/a><\/span>  Lancet Glob Health<\/span> 9(1):e33-e43<\/span><\/p>

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Ebruke BE; Deloria Knoll M; Haddix M; Zaman SMA; Prosperi C; Feikin DR; Hammitt LL; Levine OS; O'Brien KL; Murdoch DR; Brooks WA; Scott JAG; Kotloff KL; Madhi SA; Thea DM; Baillie VL; Chisti MJ; Dione M; Driscoll AJ; Fancourt N; Karron RA; Le TT; Mohamed S; Moore DP; Morpeth SC; Mwaba J; Mwansa J; Bin Shahid ASMS; Sow SO; Tapia MD; Antonio M; Howie SRC<\/span>, 2021<\/span>. The Etiology of Pneumonia From Analysis of Lung Aspirate and Pleural Fluid Samples: Findings From the Pneumonia Etiology Research for Child Health (PERCH) Study.<\/a><\/span>  Clin Infect Dis<\/span> 73(11):e3788-e3796<\/span><\/p>

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Taylor AW; Blau DM; Bassat Q; Onyango D; Kotloff KL; Arifeen SE; Mandomando I; Chawana R; Baillie VL; Akelo V; Tapia MD; Salzberg NT; Keita AM; Morris T; Nair S; Assefa N; Seale AC; Scott JAG; Kaiser R; Jambai A; Barr BAT; Gurley ES; Ordi J; Zaki SR; Sow SO; Islam F; Rahman A; Dowell SF; Koplan JP; Raghunathan PL; Madhi SA; Breiman RF<\/span>, 2020<\/span>. Initial findings from a novel population-based child mortality surveillance approach: a descriptive study.<\/a><\/span>  Lancet Glob Health<\/span> 8(7):e909-e919<\/span><\/p>

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Baillie VL; Moore DP; Mathunjwa A; Morailane P; Sim\u00f5es EAF; Madhi SA<\/span>, 2020<\/span>. A prospective case-control study on the association of Rhinovirus nasopharyngeal viral load and viremia in South African children hospitalized with severe pneumonia.<\/a><\/span>  J Clin Virol<\/span> 125:104288<\/span><\/p>

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Gallagher KE; Knoll MD; Prosperi C; Baggett HC; Brooks WA; Feikin DR; Hammitt LL; Howie SRC; Kotloff KL; Levine OS; Madhi SA; Murdoch DR; O'Brien KL; Thea DM; Awori JO; Baillie VL; Ebruke BE; Goswami D; Kamau A; Maloney SA; Moore DP; Mwananyanda L; Olutunde EO; Seidenberg P; Sissoko S; Sylla M; Thamthitiwat S; Zaman K; Scott JAG<\/span>, 2020<\/span>. The Predictive Performance of a Pneumonia Severity Score in Human Immunodeficiency Virus-negative Children Presenting to Hospital in 7 Low- and Middle-income Countries.<\/a><\/span>  Clin Infect Dis<\/span> 70(6):1050-1057<\/span><\/p>

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Li Y; Reeves RM; Wang X; Bassat Q; Brooks WA; Cohen C; Moore DP; Nunes M; Rath B; Campbell H; Nair H<\/span>, 2019<\/span>. Global patterns in monthly activity of influenza virus, respiratory syncytial virus, parainfluenza virus, and metapneumovirus: a systematic analysis.<\/a><\/span>  Lancet Glob Health<\/span> 7(8):e1031-e1045<\/span><\/p>

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Baillie VL; Moore DP; Mathunjwa A; Morailane P; Sim\u00f5es EAF; Madhi SA<\/span>, 2019<\/span>. Molecular Subtyping of Human Rhinovirus in Children from Three Sub-Saharan African Countries.<\/a><\/span>  J Clin Microbiol<\/span> 57<\/span>.<\/p>

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2019<\/span>. Causes of severe pneumonia requiring hospital admission in children without HIV infection from Africa and Asia: the PERCH multi-country case-control study.<\/a><\/span>  Lancet<\/span> 394(10200):757-779<\/span><\/p>

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Baillie VL; Olwagen CP; Madhi SA<\/span>, 2018<\/span>. Review on Clinical and Molecular Epidemiology of Human Rhinovirus-Associated Lower Respiratory Tract Infections in African and Southeast Asian Children.<\/a><\/span>  Pediatr Infect Dis J<\/span> 37(7):e185-e194<\/span><\/p>

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Shi T; McAllister DA; O'Brien KL; Simoes EAF; Madhi SA; Gessner BD; Polack FP; Balsells E; Acacio S; Aguayo C; Alassani I; Ali A; Antonio M; Awasthi S; Awori JO; Azziz-Baumgartner E; Baggett HC; Baillie VL; Balmaseda A; Barahona A; Basnet S; Bassat Q; Basualdo W; Bigogo G; Bont L; Breiman RF; Brooks WA; Broor S; Bruce N; Bruden D; Buchy P; Campbell S; Carosone-Link P; Chadha M; Chipeta J; Chou M; Clara W; Cohen C; de Cuellar E; Dang DA; Dash-Yandag B; Deloria-Knoll M; Dherani M; Eap T; Ebruke BE; Echavarria M; de Freitas L\u00e1zaro Emediato CC; Fasce RA; Feikin DR; Feng L; Gentile A; Gordon A; Goswami D; Goyet S; Groome M; Halasa N; Hirve S; Homaira N; Howie SRC; Jara J; Jroundi I; Kartasasmita CB; Khuri-Bulos N; Kotloff KL; Krishnan A; Libster R; Lopez O; Lucero MG; Lucion F; Lupisan SP; Marcone DN; McCracken JP; Mejia M; Moisi JC; Montgomery JM; Moore DP; Moraleda C; Moyes J; Munywoki P; Mutyara K; Nicol MP; Nokes DJ; Nymadawa P; da Costa Oliveira MT; Oshitani H; Pandey N; Paranhos-Baccal\u00e0 G; Phillips LN; Picot VS; Rahman M; Rakoto-Andrianarivelo M; Rasmussen ZA; Rath BA; Robinson A; Romero C; Russomando G; Salimi V; Sawatwong P; Scheltema N; Schweiger B; Scott JAG; Seidenberg P; Shen K; Singleton R; Sotomayor V; Strand TA; Sutanto A; Sylla M; Tapia MD; Thamthitiwat S; Thomas ED; Tokarz R; Turner C; Venter M; Waicharoen S; Wang J; Watthanaworawit W; Yoshida LM; Yu H; Zar HJ; Campbell H; Nair H<\/span>, 2017<\/span>. Global, regional, and national disease burden estimates of acute lower respiratory infections due to respiratory syncytial virus in young children in 2015: a systematic review and modelling study.<\/a><\/span>  Lancet<\/span> 390(10098):946-958<\/span><\/p>

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Higdon MM; Le T; O'Brien KL; Murdoch DR; Prosperi C; Baggett HC; Brooks WA; Feikin DR; Hammitt LL; Howie SRC; Kotloff KL; Levine OS; Scott JAG; Thea DM; Awori JO; Baillie VL; Cascio S; Chuananon S; DeLuca AN; Driscoll AJ; Ebruke BE; Endtz HP; Kaewpan A; Kahn G; Karani A; Karron RA; Moore DP; Park DE; Rahman MZ; Salaudeen R; Seidenberg P; Somwe SW; Sylla M; Tapia MD; Zeger SL; Deloria Knoll M; Madhi SA<\/span>, 2017<\/span>. Association of C-Reactive Protein With Bacterial and Respiratory Syncytial Virus-Associated Pneumonia Among Children Aged <5 Years in the PERCH Study.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S378-S386<\/span><\/p>

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Deloria Knoll M; Morpeth SC; Scott JAG; Watson NL; Park DE; Baggett HC; Brooks WA; Feikin DR; Hammitt LL; Howie SRC; Kotloff KL; Levine OS; O'Brien KL; Thea DM; Ahmed D; Antonio M; Awori JO; Baillie VL; Chipeta J; Deluca AN; Dione M; Driscoll AJ; Higdon MM; Jatapai A; Karron RA; Mazumder R; Moore DP; Mwansa J; Nyongesa S; Prosperi C; Seidenberg P; Siludjai D; Sow SO; Tamboura B; Zeger SL; Murdoch DR; Madhi SA<\/span>, 2017<\/span>. Evaluation of Pneumococcal Load in Blood by Polymerase Chain Reaction for the Diagnosis of Pneumococcal Pneumonia in Young Children in the PERCH Study.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S357-S367<\/span><\/p>

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Feikin DR; Fu W; Park DE; Shi Q; Higdon MM; Baggett HC; Brooks WA; Deloria Knoll M; Hammitt LL; Howie SRC; Kotloff KL; Levine OS; Madhi SA; Scott JAG; Thea DM; Adrian PV; Antonio M; Awori JO; Baillie VL; DeLuca AN; Driscoll AJ; Ebruke BE; Goswami D; Karron RA; Li M; Morpeth SC; Mwaba J; Mwansa J; Prosperi C; Sawatwong P; Sow SO; Tapia MD; Whistler T; Zaman K; Zeger SL; O' Brien KL; Murdoch DR<\/span>, 2017<\/span>. Is Higher Viral Load in the Upper Respiratory Tract Associated With Severe Pneumonia? Findings From the PERCH Study.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S337-S346<\/span><\/p>

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Morpeth SC; Deloria Knoll M; Scott JAG; Park DE; Watson NL; Baggett HC; Brooks WA; Feikin DR; Hammitt LL; Howie SRC; Kotloff KL; Levine OS; Madhi SA; O'Brien KL; Thea DM; Adrian PV; Ahmed D; Antonio M; Bunthi C; DeLuca AN; Driscoll AJ; Githua LP; Higdon MM; Kahn G; Karani A; Karron RA; Kwenda G; Makprasert S; Mazumder R; Moore DP; Mwansa J; Nyongesa S; Prosperi C; Sow SO; Tamboura B; Whistler T; Zeger SL; Murdoch DR<\/span>, 2017<\/span>. Detection of Pneumococcal DNA in Blood by Polymerase Chain Reaction for Diagnosing Pneumococcal Pneumonia in Young Children From Low- and Middle-Income Countries.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S347-S356<\/span><\/p>

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Park DE; Baggett HC; Howie SRC; Shi Q; Watson NL; Brooks WA; Deloria Knoll M; Hammitt LL; Kotloff KL; Levine OS; Madhi SA; Murdoch DR; O'Brien KL; Scott JAG; Thea DM; Ahmed D; Antonio M; Baillie VL; DeLuca AN; Driscoll AJ; Fu W; Gitahi CW; Olutunde E; Higdon MM; Hossain L; Karron RA; Maiga AA; Maloney SA; Moore DP; Morpeth SC; Mwaba J; Mwenechanya M; Prosperi C; Sylla M; Thamthitiwat S; Zeger SL; Feikin DR<\/span>, 2017<\/span>. Colonization Density of the Upper Respiratory Tract as a Predictor of Pneumonia-Haemophilus influenzae, Moraxella catarrhalis, Staphylococcus aureus, and Pneumocystis jirovecii.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S328-S336<\/span><\/p>

<\/p>

Driscoll AJ; Deloria Knoll M; Hammitt LL; Baggett HC; Brooks WA; Feikin DR; Kotloff KL; Levine OS; Madhi SA; O'Brien KL; Scott JAG; Thea DM; Howie SRC; Adrian PV; Ahmed D; DeLuca AN; Ebruke BE; Gitahi C; Higdon MM; Kaewpan A; Karani A; Karron RA; Mazumder R; McLellan J; Moore DP; Mwananyanda L; Park DE; Prosperi C; Rhodes J; Saifullah M; Seidenberg P; Sow SO; Tamboura B; Zeger SL; Murdoch DR<\/span>, 2017<\/span>. The Effect of Antibiotic Exposure and Specimen Volume on the Detection of Bacterial Pathogens in Children With Pneumonia.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S368-S377<\/span><\/p>

<\/p>

Baggett HC; Watson NL; Deloria Knoll M; Brooks WA; Feikin DR; Hammitt LL; Howie SRC; Kotloff KL; Levine OS; Madhi SA; Murdoch DR; Scott JAG; Thea DM; Antonio M; Awori JO; Baillie VL; DeLuca AN; Driscoll AJ; Duncan J; Ebruke BE; Goswami D; Higdon MM; Karron RA; Moore DP; Morpeth SC; Mulindwa JM; Park DE; Paveenkittiporn W; Piralam B; Prosperi C; Sow SO; Tapia MD; Zaman K; Zeger SL; O'Brien KL<\/span>, 2017<\/span>. Density of Upper Respiratory Colonization With Streptococcus pneumoniae and Its Role in the Diagnosis of Pneumococcal Pneumonia Among Children Aged <5 Years in the PERCH Study.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S317-S327<\/span><\/p>

<\/p>

Moore DP; Higdon MM; Hammitt LL; Prosperi C; DeLuca AN; Da Silva P; Baillie VL; Adrian PV; Mudau A; Deloria Knoll M; Feikin DR; Murdoch DR; O'Brien KL; Madhi SA<\/span>, 2017<\/span>. The Incremental Value of Repeated Induced Sputum and Gastric Aspirate Samples for the Diagnosis of Pulmonary Tuberculosis in Young Children With Acute Community-Acquired Pneumonia.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S309-S316<\/span><\/p>

<\/p>

Thea DM; Seidenberg P; Park DE; Mwananyanda L; Fu W; Shi Q; Baggett HC; Brooks WA; Feikin DR; Howie SRC; Knoll MD; Kotloff KL; Levine OS; Madhi SA; O'Brien KL; Scott JAG; Antonio M; Awori JO; Baillie VL; DeLuca AN; Driscoll AJ; Higdon MM; Hossain L; Jahan Y; Karron RA; Kazungu S; Li M; Moore DP; Morpeth SC; Ofordile O; Prosperi C; Sangwichian O; Sawatwong P; Sylla M; Tapia MD; Zeger SL; Murdoch DR; Hammitt LL<\/span>, 2017<\/span>. Limited Utility of Polymerase Chain Reaction in Induced Sputum Specimens for Determining the Causes of Childhood Pneumonia in Resource-Poor Settings: Findings From the Pneumonia Etiology Research for Child Health (PERCH) Study.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S289-S300<\/span><\/p>

<\/p>

Murdoch DR; Morpeth SC; Hammitt LL; Driscoll AJ; Watson NL; Baggett HC; Brooks WA; Deloria Knoll M; Feikin DR; Kotloff KL; Levine OS; Madhi SA; O'Brien KL; Scott JAG; Thea DM; Adrian PV; Ahmed D; Alam M; Awori JO; DeLuca AN; Higdon MM; Karron RA; Kwenda G; Machuka EM; Makprasert S; McLellan J; Moore DP; Mwaba J; Mwarumba S; Park DE; Prosperi C; Sangwichian O; Sissoko S; Tapia MD; Zeger SL; Howie SRC<\/span>, 2017<\/span>. The Diagnostic Utility of Induced Sputum Microscopy and Culture in Childhood Pneumonia.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S280-S288<\/span><\/p>

<\/p>

Fancourt N; Deloria Knoll M; Baggett HC; Brooks WA; Feikin DR; Hammitt LL; Howie SRC; Kotloff KL; Levine OS; Madhi SA; Murdoch DR; Scott JAG; Thea DM; Awori JO; Barger-Kamate B; Chipeta J; DeLuca AN; Diallo M; Driscoll AJ; Ebruke BE; Higdon MM; Jahan Y; Karron RA; Mahomed N; Moore DP; Nahar K; Naorat S; Ominde MS; Park DE; Prosperi C; Wa Somwe S; Thamthitiwat S; Zaman SMA; Zeger SL; O'Brien KL<\/span>, 2017<\/span>. Chest Radiograph Findings in Childhood Pneumonia Cases From the Multisite PERCH Study.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S262-S270<\/span><\/p>

<\/p>

Murdoch DR; Morpeth SC; Hammitt LL; Driscoll AJ; Watson NL; Baggett HC; Brooks WA; Deloria Knoll M; Feikin DR; Kotloff KL; Levine OS; Madhi SA; O'Brien KL; Scott JAG; Thea DM; Ahmed D; Awori JO; DeLuca AN; Ebruke BE; Higdon MM; Jorakate P; Karron RA; Kazungu S; Kwenda G; Hossain L; Makprasert S; Moore DP; Mudau A; Mwaba J; Panchalingam S; Park DE; Prosperi C; Salaudeen R; Toure A; Zeger SL; Howie SRC<\/span>, 2017<\/span>. Microscopic Analysis and Quality Assessment of Induced Sputum From Children With Pneumonia in the PERCH Study.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S271-S279<\/span><\/p>

<\/p>

Driscoll AJ; Karron RA; Morpeth SC; Bhat N; Levine OS; Baggett HC; Brooks WA; Feikin DR; Hammitt LL; Howie SRC; Knoll MD; Kotloff KL; Madhi SA; Scott JAG; Thea DM; Adrian PV; Ahmed D; Alam M; Anderson TP; Antonio M; Baillie VL; Dione M; Endtz HP; Gitahi C; Karani A; Kwenda G; Maiga AA; McClellan J; Mitchell JL; Morailane P; Mugo D; Mwaba J; Mwansa J; Mwarumba S; Nyongesa S; Panchalingam S; Rahman M; Sawatwong P; Tamboura B; Toure A; Whistler T; O'Brien KL; Murdoch DR<\/span>, 2017<\/span>. Standardization of Laboratory Methods for the PERCH Study.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S245-S252<\/span><\/p>

<\/p>

DeLuca AN; Hammitt LL; Kim J; Higdon MM; Baggett HC; Brooks WA; Howie SRC; Deloria Knoll M; Kotloff KL; Levine OS; Madhi SA; Murdoch DR; Scott JAG; Thea DM; Amornintapichet T; Awori JO; Chuananon S; Driscoll AJ; Ebruke BE; Hossain L; Jahan Y; Kagucia EW; Kazungu S; Moore DP; Mudau A; Mwananyanda L; Park DE; Prosperi C; Seidenberg P; Sylla M; Tapia MD; Zaman SMA; O'Brien KL<\/span>, 2017<\/span>. Safety of Induced Sputum Collection in Children Hospitalized With Severe or Very Severe Pneumonia.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S301-S308<\/span><\/p>

<\/p>

Crawley J; Prosperi C; Baggett HC; Brooks WA; Deloria Knoll M; Hammitt LL; Howie SRC; Kotloff KL; Levine OS; Madhi SA; Murdoch DR; O'Brien KL; Thea DM; Awori JO; Bunthi C; DeLuca AN; Driscoll AJ; Ebruke BE; Goswami D; Hidgon MM; Karron RA; Kazungu S; Kourouma N; Mackenzie G; Moore DP; Mudau A; Mwale M; Nahar K; Park DE; Piralam B; Seidenberg P; Sylla M; Feikin DR; Scott JAG<\/span>, 2017<\/span>. Standardization of Clinical Assessment and Sample Collection Across All PERCH Study Sites.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S228-S237<\/span><\/p>

<\/p>

Higdon MM; Hammitt LL; Deloria Knoll M; Baggett HC; Brooks WA; Howie SRC; Kotloff KL; Levine OS; Madhi SA; Murdoch DR; Scott JAG; Thea DM; Driscoll AJ; Karron RA; Park DE; Prosperi C; Zeger SL; O'Brien KL; Feikin DR<\/span>, 2017<\/span>. Should Controls With Respiratory Symptoms Be Excluded From Case-Control Studies of Pneumonia Etiology? Reflections From the PERCH Study.<\/a><\/span>  Clin Infect Dis<\/span> 64(suppl_3):S205-S212<\/span><\/p>

<\/p>

Barger-Kamate B; Deloria Knoll M; Kagucia EW; Prosperi C; Baggett HC; Brooks WA; Feikin DR; Hammitt LL; Howie SR; Levine OS; Madhi SA; Scott JA; Thea DM; Amornintapichet T; Anderson TP; Awori JO; Baillie VL; Chipeta J; DeLuca AN; Driscoll AJ; Goswami D; Higdon MM; Hossain L; Karron RA; Maloney S; Moore DP; Morpeth SC; Mwananyanda L; Ofordile O; Olutunde E; Park DE; Sow SO; Tapia MD; Murdoch DR; O'Brien KL; Kotloff KL<\/span>, 2016<\/span>. Pertussis-Associated Pneumonia in Infants and Children From Low- and Middle-Income Countries Participating in the PERCH Study.<\/a><\/span>  Clin Infect Dis<\/span> 63(suppl 4):S187-S196<\/span><\/p>

<\/p>

Baillie VL; Bouwer G<\/span>, 2013<\/span>. The effect of inoculum dose on the genetic diversity detected within Helicoverpa armigera nucleopolyhedrovirus populations.<\/a><\/span>  J Gen Virol<\/span> 94(Pt 11):2524-2529<\/span><\/p>

<\/p>

Baillie VL; Bouwer G<\/span>, 2012<\/span>. High levels of genetic variation within Helicoverpa armigera nucleopolyhedrovirus populations in individual host insects.<\/a><\/span>  Arch Virol<\/span> 157(12):2281-9<\/span><\/p>

<\/p>

Baillie VL; Bouwer G<\/span>, 2012<\/span>. High levels of genetic variation within core Helicoverpa armigera nucleopolyhedrovirus genes.<\/a><\/span>  Virus Genes<\/span> 44(1):149-62<\/span><\/p>

<\/p>

Baillie VL; Bouwer G<\/span>, 2011<\/span>. Development of highly sensitive assays for detection of genetic variation in key Helicoverpa armigera nucleopolyhedrovirus genes.<\/a><\/span>  J Virol Methods<\/span> 178(1-2):179-85<\/span><\/p>

<\/p>

Publication list retrieved from NCBI<\/a> using ImpactPubs<\/a><\/p>.<\/div><\/div><\/div><\/div><\/p>\n","protected":false},"excerpt":{"rendered":"

A research scientist at the Vaccines and Infectious Diseases Analytics (VIDA) Research Unit.<\/p>\n","protected":false},"author":1,"featured_media":812,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","format":"standard","meta":{"rank_math_lock_modified_date":false,"footnotes":""},"faq_category":[44],"class_list":["post-916","avada_faq","type-avada_faq","status-publish","format-standard","has-post-thumbnail","hentry","faq_category-researchers"],"acf":[],"_links":{"self":[{"href":"https:\/\/wits-vida.org\/wp-json\/wp\/v2\/avada_faq\/916","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/wits-vida.org\/wp-json\/wp\/v2\/avada_faq"}],"about":[{"href":"https:\/\/wits-vida.org\/wp-json\/wp\/v2\/types\/avada_faq"}],"author":[{"embeddable":true,"href":"https:\/\/wits-vida.org\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/wits-vida.org\/wp-json\/wp\/v2\/comments?post=916"}],"version-history":[{"count":8,"href":"https:\/\/wits-vida.org\/wp-json\/wp\/v2\/avada_faq\/916\/revisions"}],"predecessor-version":[{"id":4274,"href":"https:\/\/wits-vida.org\/wp-json\/wp\/v2\/avada_faq\/916\/revisions\/4274"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/wits-vida.org\/wp-json\/wp\/v2\/media\/812"}],"wp:attachment":[{"href":"https:\/\/wits-vida.org\/wp-json\/wp\/v2\/media?parent=916"}],"wp:term":[{"taxonomy":"faq_category","embeddable":true,"href":"https:\/\/wits-vida.org\/wp-json\/wp\/v2\/faq_category?post=916"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}